Homer
HOMER (Hypergeometric Optimization of Motif
EnRichment) is a suite of tools for Motif Discovery and
ChIP-Seq analysis. It is a collection of command line programs for unix-style operating systems written in mostly perl and c++. Homer was primarily written as a de novo motif discovery algorithm that is well suited for finding 8-12 bp motifs in large scale genomics data.
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AdminUser - 12 Jan 2017