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SavingAndImportingPythonEnvironments
It's handy to make a package list from your conda virtual environment in case you install something that breaks it or you want to replicate the packages exactly o...
SavingTheEnvironmentInWorkDirectory
Python virtual environments (VE )are saved in your home directory by default. However, in case you are running out of space in your home directory, you can save t...
SavingTheRLibrariesInWorkDirectory
The base R package is provided on Arc via modules on the compute nodes. First, start an interactive session on a compute node by tpying: srun p compute1 n 1 t ...
ShamuFairUsePolicy
Arc Fair Use Policy Active Jobs Compute nodes will no longer be shared among multiple users. Instead, when a user grabs a compute node, they will be the only use...
SoftwareAvailable
Pasted below is the list of software packages that are available on Arc (as of August 23, 2021) through system wide modules. This list will likely change over tim...
Number of topics: 6
To display the above search results in a topic, copy-paste the following markup:
%SEARCH{
"^S"
type="regex"
scope="topic"
}%
%INCLUDE{"%TOPIC%" section="title"}%
%INCLUDE{"%TOPIC%" section="form"}%
%INCLUDE{"%TOPIC%" section="searchresults"}%
%INCLUDE{"%TOPIC%" section="title"}%
%INCLUDE{"%TOPIC%" section="form"}%
%INCLUDE{"%TOPIC%" section="searchresults"}%
%INCLUDE{"%TOPIC%" section="querysearchexample"}%
%INCLUDE{"%TOPIC%" section="title"}%
%INCLUDE{"%TOPIC%" section="tabs"}%
%INCLUDE{"%SYSTEMWEB%.SearchHelp"}%
---+!! %MAKETEXT{"Search in [_1] Web" args="<nop>%BASEWEB%"}%
%INCLUDE{"%TOPIC%" section="tabs"}%<noautolink>
<div class='foswikiWebSearchForm'>
<form name='WebSearchForm' action='%SCRIPTURLPATH{view}%/%BASEWEB%/%TOPIC%'>
<input type='hidden' name='tab' value='%URLPARAM{"tab" default="search"}%' />
<div class='foswikiFormSteps'>
<div class='foswikiFormStep'>
<input type='text' class='foswikiInputField foswikiFocus' name='search' value='%URLPARAM{"search" encode="entity"}%' size='40' style='width:99%' placeholder='%MAKETEXT{"Search"}%' />
</div>
<div class='foswikiFormStep'>
%TWISTY{
id="searchOptions"
mode="div"
start="%IF{
"$'URLPARAM{search}'=''"
then="show"
else="hide"
}%"
link="<strong>%MAKETEXT{"Search options"}%</strong>"
showimgleft="%ICONURLPATH{toggleopen}%"
hideimgleft="%ICONURLPATH{toggleclose}%"
}%%IF{
"$'URLPARAM{tab}'='search' OR $'URLPARAM{tab}'='' AND NOT $TAB='advanced'"
then="$percentINCLUDE{$quot%TOPIC%$quot section=$quotoptionssimple$quot}$percent"
}%%IF{
"$'URLPARAM{tab}'='searchadvanced' OR $TAB='advanced'"
then="$percentINCLUDE{$quot%TOPIC%$quot section=$quotoptionsadvanced$quot}$percent"
}%%ENDTWISTY%</div>
<div class='foswikiFormStep'>
<input type='submit' class='foswikiSubmit' value='%MAKETEXT{"Search"}%' />
</div>
</div><!--//foswikiFormSteps-->
</form>
</div></noautolink>
search=%URLPARAM{"search" encode="url"}%;scope=%URLPARAM{"scope" encode="url" default="all"}%;web=%URLPARAM{"web" encode="url"}%;recurse=%URLPARAM{"recurse" encode="url"}%;type=%URLPARAM{"type" encode="url" default="%SEARCHDEFAULTTTYPE%"}%
%INCLUDE{"%TOPIC%" section="searchparamssimple"}%;type=%URLPARAM{"type" encode="url" default="%SEARCHDEFAULTTTYPE%"}%;nosearch=%URLPARAM{"nosearch" encode="url"}%;limit=%URLPARAM{"limit" encode="url"}%;excludetopic=%URLPARAM{"excludetopic" encode="url"}%;casesensitive=%URLPARAM{"casesensitive" encode="url"}%
<noautolink><div class='foswikiTabs'>
<ul>
<li%IF{
"$'URLPARAM{tab}'='search' OR $'URLPARAM{tab}'='' AND NOT $TAB='advanced'"
then=" class='foswikiActiveTab'"
}%><a href='%SCRIPTURL{view}%/%BASEWEB%/%TOPIC%?%INCLUDE{"%TOPIC%" section="searchparamssimple"}%;tab=search'>%MAKETEXT{"Search"}%</a></li>
<li%IF{
"$'URLPARAM{tab}'='searchadvanced' OR $TAB='advanced'" then=" class='foswikiActiveTab'"
}%><a href='%SCRIPTURL{view}%/%BASEWEB%/%TOPIC%?%INCLUDE{"%TOPIC%" section="searchparamsadvanced"}%;tab=searchadvanced'>%MAKETEXT{"Advanced search"}%</a></li>
<li%IF{
"$'URLPARAM{tab}'='az'" then=" class='foswikiActiveTab'"
}%><a href='%SCRIPTURL{view}%/%BASEWEB%/%TOPIC%?%INCLUDE{"%TOPIC%" section="searchparamsadvanced"}%;tab=az'>%MAKETEXT{"A-Z"}%</a></li>
<li%IF{
"$'URLPARAM{tab}'='help'" then=" class='foswikiActiveTab'"
}%><a href='%SCRIPTURL{view}%/%BASEWEB%/%TOPIC%?%INCLUDE{"%TOPIC%" section="searchparamsadvanced"}%;tab=help'>%MAKETEXT{"Help"}%</a></li>
</ul>
<div class='foswikiClear'></div>
</div></noautolink>
<table id='foswikiSearchTable' class='foswikiSearchTable' border='0' cellspacing='0' cellpadding='0'>
<tr>
<th>%MAKETEXT{"Search where:"}%</th>
<td>
<input type='radio' class='foswikiRadioButton' id='textbody' name='scope' value='text' %IF{
"'%URLPARAM{"scope"}%'='text'"
then="checked='checked'"
}% /><label for='textbody'> %MAKETEXT{"Text body"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='topictitle' name='scope' value='topic' %IF{
"'%URLPARAM{"scope" default="all"}%'='topic'"
then="checked='checked'"
}% /><label for='topictitle'> %MAKETEXT{"Topic title"}% </label><br />
<input type='radio' class='foswikiRadioButton' id='both' name='scope' value='all' %IF{
"'%URLPARAM{"scope" default="all"}%'='all'"
then="checked='checked'"
}% /><label for='both'> %MAKETEXT{"Both body and title"}%</label>
<hr />
<input type='checkbox' class='foswikiCheckbox' id='web' name='web' value='all' %IF{
"'%URLPARAM{web}%'='all'"
then="checked='checked'"
}% /><label for='web'> %MAKETEXT{"All public webs"}%</label> <span class='foswikiSmall'>%MAKETEXT{"(otherwise search [_1] Web only)" args="<nop>%BASEWEB%"}%</span>
<input type='checkbox' class='foswikiCheckbox' id='recurse' name='recurse' value='on' %IF{
"'%URLPARAM{recurse}%'='on'"
then="checked='checked'"
}% /><label for='recurse'> %MAKETEXT{"Subwebs"}%</label>
</td>
</tr>
</table>
<table id='foswikiSearchTable' class='foswikiSearchTable' border='0' cellspacing='0' cellpadding='0'>
<tr>
<th>%MAKETEXT{"Search where:"}%</th>
<td>
<input type='radio' class='foswikiRadioButton' id='textbody' name='scope' value='text' %IF{
"'%URLPARAM{"scope"}%'='text'"
then="checked='checked'"
}% /><label for='textbody'> %MAKETEXT{"Text body"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='topictitle' name='scope' value='topic' %IF{
"'%URLPARAM{"scope" default="all"}%'='topic'"
then="checked='checked'"
}% /><label for='topictitle'> %MAKETEXT{"Topic title"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='both' name='scope' value='all' %IF{
"'%URLPARAM{"scope" default="all"}%'='all'"
then="checked='checked'"
}% /><label for='both'> %MAKETEXT{"Both body and title"}%</label>
<hr />
<input type='checkbox' class='foswikiCheckbox' id='web' name='web' value='all' %IF{
"'%URLPARAM{web}%'='all'"
then="checked='checked'"
}% /><label for='web'> %MAKETEXT{"All public webs"}%</label> <span class='foswikiSmall'>%MAKETEXT{"(otherwise search [_1] Web only)" args="<nop>%BASEWEB%"}%</span>
<input type='checkbox' class='foswikiCheckbox' id='recurse' name='recurse' value='on' %IF{
"'%URLPARAM{recurse}%'='on'"
then="checked='checked'"
}% /><label for='recurse'> %MAKETEXT{"Subwebs"}%</label>
</td>
</tr>
<tr>
<th>%MAKETEXT{"Sort results by:"}%</th>
<td>
<input type='radio' class='foswikiRadioButton' id='topic' name='order' value='topic' %IF{
"'%URLPARAM{"order" default="topic"}%'='topic'"
then="checked='checked'"
}% /><label for='topic'> %MAKETEXT{"Topic name"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='modified' name='order' value='modified' %IF{
"'%URLPARAM{order}%'='modified'"
then="checked='checked'"
}% /><label for='modified'> %MAKETEXT{"Last modified time"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='editby' name='order' value='editby' %IF{
"'%URLPARAM{order}%'='editby'"
then="checked='checked'"
}% /><label for='editby'> %MAKETEXT{"Last editor"}%</label>
<hr />
<input type='checkbox' class='foswikiCheckbox' name='reverse' id='reverse' %IF{
"'%URLPARAM{reverse}%'='on'"
then="checked='checked'"
}% /><label for='reverse'> %MAKETEXT{"In reversed order"}%</label>
</td>
</tr>
<tr>
<th>%MAKETEXT{"Make search:"}%</th>
<td>%MAKETEXT{"Selections apply to search in \"text body\""}% <span class='foswikiUnvisited foswikiSmall'>%POPUPWINDOW{"%SYSTEMWEB%.SearchHelp" label="%MAKETEXT{"Help"}%"}%</span>
<hr />
<input type='checkbox' class='foswikiCheckbox' id='casesensitive' name='casesensitive' %IF{
"'%URLPARAM{casesensitive}%'='on'"
then="checked='checked'"
}% /><label for='casesensitive'> %MAKETEXT{"Case sensitive"}%</label><br />
<hr />
<input type='radio' class='foswikiRadioButton' id='word' name='type' value='word' %IF{
"'%URLPARAM{"type" default="%SEARCHDEFAULTTTYPE%"}%'='word'"
then="checked='checked'"
}% /><label for='word'> %MAKETEXT{"Word search"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='keyword' name='type' value='keyword' %IF{
"'%URLPARAM{"type" default="%SEARCHDEFAULTTTYPE%"}%'='keyword'"
then="checked='checked'"
}% /><label for='keyword'> %MAKETEXT{"Keyword search"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='literal' name='type' value='literal' %IF{
"'%URLPARAM{type}%'='literal'"
then="checked='checked'"
}% /><label for='literal'> %MAKETEXT{"Literal search"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='regex' name='type' value='regex' %IF{
"'%URLPARAM{type}%'='regex'"
then="checked='checked'"
}% /><label for='regex'> %MAKETEXT{"Regular expression search"}%</label><br />
<input type='radio' class='foswikiRadioButton' id='query' name='type' value='query' %IF{
"'%URLPARAM{type}%'='query'"
then="checked='checked'"
}% /><label for='query'> %MAKETEXT{"Query Search"}%</label>
</td>
</tr>
<tr>
<th><b>%MAKETEXT{"Don't show:"}%</b></th>
<td><input type='checkbox' class='foswikiCheckbox' id='nosearch' name='nosearch' %IF{
"'%URLPARAM{nosearch}%'='on'"
then="checked='checked'"
}% /><label for='nosearch'> %MAKETEXT{"Search string"}%</label><br />
<input type='checkbox' class='foswikiCheckbox' id='nosummary' name='nosummary' %IF{
"'%URLPARAM{nosummary}%'='on'"
then="checked='checked'"
}% /><label for='nosummary'> %MAKETEXT{"Summaries"}%</label><br />
<input type='checkbox' class='foswikiCheckbox' id='nototal' name='nototal' %IF{
"'%URLPARAM{nototal}%'='on'"
then="checked='checked'"
}% /><label for='nototal'> %MAKETEXT{"Total matches"}%</label><br />
</td>
</tr>
<tr>
<th class='foswikiLast'>%MAKETEXT{"Limit results to:"}%</th>
<td class='foswikiLast'><input type='text' class='foswikiInputField' id='limit' name='limit' size='3' value='%IF{
"'%URLPARAM{"limit" default="all"}%'='all'"
then="all"
else="%URLPARAM{limit}%"
}%' /><label for='limit'> %MAKETEXT{"Topics per web"}% </label><span class='foswikiSmall'>%MAKETEXT{"(=all= to show all topics)"}%</span>
</td>
</tr>
</table>
%IF{
"$'URLPARAM{search}'!=''"
then="<h2>%MAKETEXT{"Search results"}%</h2>
$percentINCLUDE{$quot%SYSTEMWEB%.%TOPIC%$quot section=$quotsearchfeed$quot}$percent"
}%%SEARCH{
"%URLPARAM{"search" encode="entities, quote"}%" decode="entities"
type="%URLPARAM{"type" default="word"}%"
scope="%URLPARAM{"scope" encode="safe, quote"}%"
web="%URLPARAM{"web" encode="safe, quote"}%"%IF{
"{EnableHierarchicalWebs}"
then="recurse=\"%URLPARAM{"recurse" encode="safe, quote"}%\""
}%
topic="%URLPARAM{"searchtopic" encode="safe, quote"}%"
excludetopic="%URLPARAM{"excludetopic" encode="safe, quote"}%"
nosearch="%URLPARAM{"nosearch" encode="safe, quote"}%"
casesensitive="%URLPARAM{"casesensitive" encode="safe, quote"}%"
nosummary="%URLPARAM{"nosummary" encode="safe, quote"}%"
nototal="%URLPARAM{"nototal" encode="safe, quote"}%"
order="%URLPARAM{"order" encode="safe, quote"}%"
reverse="%URLPARAM{"reverse" encode="safe, quote"}%"
pager="on"
limit="%URLPARAM{"limit" encode="safe, quote" default="%DEFAULTPAGESIZE%"}%"
pagesize="%DEFAULTPAGESIZE%"
zeroresults="%IF{
"defined search and $search!=''"
then="on"
else="off"
}%"
}%
<div>%ICON{"rss-small"}%%INCLUDE{"%SYSTEMWEB%.%TOPIC%" section="searchfeedlink"}%</div>
<a href='%SCRIPTURL{"view"}%/%BASEWEB%/WebRss?search=%URLPARAM{"search" encode="url"}%;type=%IF{
"'%URLPARAM{"regex"}%'='on' OR '%URLPARAM{"type"}%'='regex'"
then="regex"
else="word"
}%;excludetopic=%URLPARAM{"excludetopic" encode="url" default="%TOPIC%,%HOMETOPIC%,%STATISTICSTOPIC%"}%;web=%URLPARAM{"web" encode="url" default="%BASEWEB%"}%;recurse=%URLPARAM{"recurse" encode="url"}%;limit=%URLPARAM{"limit" encode="url" default="all"}%;scope=%URLPARAM{"scope" encode="url" default="text"}%;casesensitive=%URLPARAM{"casesensitive" encode="url" default="off"}%'>%MAKETEXT{"Get notified on changes on this search"}%</a>
%IF{
"$'URLPARAM{search}'!=''"
then='$percentINCLUDE{$quot%TOPIC%$quot section=$quot_querysearchexample$quot}$percent'
}%
<p /><div class='foswikiHelp'>
%MAKETEXT{"To display the above search results in a topic, copy-paste the following markup:"}%
<pre class='tml'>
%<nop>SEARCH{
"%URLPARAM{"search" encode="entities, quote"}%"
type="%URLPARAM{"type" default="%SEARCHDEFAULTTTYPE%"}%"%FORMAT{
"scope,web,recurse,nosearch,casesensitive,nosummary,nototal,order,reverse,limit"
type="string"
header="$n"
format="$percntIF{
\"(defined $item AND $'$item') AND ('$item' != 'recurse' OR {EnableHierarchicalWebs})\"
then=\" $item=\\"$percntURLPARAM{\"$item\" encode=\"safe, quote\"}$percnt\\"$n\"
}$percnt"
separator=""
}%}%
</pre>
</div>
%IF{
"$'URLPARAM{searchletter}'='%letter%'"
then="<strong>%letter%</strong>"
else="<a href='%SCRIPTURLPATH{"search"}%/%BASEWEB%/%TOPIC%?scope=topic&type=regex&search=%5E%letter%;$percentINCLUDE{$quot%TOPIC%$quot section=$quotsearchparamsadvanced$quot}$percent;searchletter=%letter%;tab=az'>%letter%</a>"
}%
%INCLUDE{"%TOPIC%" section="title"}%
%INCLUDE{"%TOPIC%" section="tabs"}%
<div class='foswikiWebSearchForm'>
%MAKETEXT{"List topics that start with the letter:"}% %INCLUDE{"%TOPIC%" section="letterlist"}%
</div>
%IF{
"$'URLPARAM{searchletter}'"
then="$percentINCLUDE{$quot%TOPIC%$quot section=$quotsearchresults$quot}$percent$percentINCLUDE{$quot%TOPIC%$quot section=$quotquerysearchexample$quot}$percent"
}%
<div class='foswikiHorizontalList foswikiUnvisited'>
<ul>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="A"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="B"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="C"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="D"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="E"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="F"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="G"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="H"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="I"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="J"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="K"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="L"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="M"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="N"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="O"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="P"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="Q"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="R"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="S"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="T"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="U"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="V"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="W"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="X"}%</li>
<li>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="Y"}%</li>
<li class='foswikiLast'>%INCLUDE{"%TOPIC%" section="searchbyletterlink" letter="Z"}%</li>
</ul>
<div class='foswikiClear'></div>
</div>