Software Installed on Shamu

Below is the list of software that is currently installed on Shamu. If you need additional software, please email your request to rcsg@utsa.edu.

Compilers

GCC - 4.8.5, 5.4, 6.1.0, 7.3.0, 8.2.0

Intel - 13

Intel Fortran - 15

Libraries

Atlas - 3.10.1

Applications

Ansys - v17.1, v19.0

Abaqus - 6.12-1, 2016, 2017

Blender - 2.78

Bowtie - 1.2.0

Bwa - 0.7.15

Caffe - 1.7.0

Cell Ranger - 1.2.1, 1.3.0, 2.0.0, 2.0.1, 2.1.1, 3.0.1

Cell Ranger ATAC - 1.0.1

CPLEX - 12.7.1

Fiji

Fluent

Gamess - 03March2017

Gizmo

GNUPlot - 5.0.1

Grads - 2.1.a3

GMSH - 2.9.3

Hoomd - 2.8.0

Homer - 4.8

LAMMPS - 20180822

Ansys Lumerical

LS-Dyna

Mathematica - 10.1

Matlab - R2015a, R2016a, R2016b, R2017a, R2017b, R2018a, R2019a

MFIX - 20.4.3

Mugsy - 2.3

MXnet - 1.1.0

NAMD - 2.11

NWChem - 6.6

Octave - 4.0.0

OpenFOAM - 3.0.1, 5.0, 6.0

OpenSees - 3.2.0

Paraview - 4.4.0, 5.0.0

R - 3.5.0, 3.5.1, 3.5.1-gcc4

Spyder - 3.3.6 via the anaconda3 module (newer versions can be installed in virtual environments as shown here)

TensorFlow - 1.5.0

Titan - 20141125

Torch - 7

Wgrib

Wgrib2

Canopy - 1.7.4

Photoscan Pro - Replaced with MetaShape Pro

SimVascular - 2.0.20624

VisualFM

VMD - 1.9.2

Gubbins

-- AdminUser - 07 Jun 2016